|
Gene
|
Population
|
Tajima's D
|
Fu and Li's
|
Fay and Wu's H
|
Fu's Fs
|
EWHTb
|
GMc
|
CMd
|
EDe
|
|---|
| | | |
D*
|
F*
|
D
|
F
| | | | | | |
|---|
|
OCA2
|
African (YRI)
|
0.368
|
0.67
|
0.67
|
0.71
|
0.71
|
3.16
|
1.73
|
0.18
|
0.08
|
0.01
|
0.95
|
| |
European (CEU)
|
1.36
|
0.75
|
1.14
|
0.79
|
1.21
|
-1.94
|
9.23
|
0.30
|
0.16
|
0.05
|
0.86
|
| |
East Asian (CHB)
|
0.46
|
0.70
|
0.73
|
0.74
|
0.77
|
-5.74
|
6.78
|
0.47
|
0.29
|
0.38
|
0.48
|
|
TYRP1
|
African (YRI)
|
-0.99
|
0.02
|
-0.39
|
-0.02
|
-0.45
|
-7.76
|
-3.4
|
0.10
|
0.66
|
0.65
|
0.08
|
| |
European (CEU)
|
0.45
|
-0.70
|
-0.37
|
0.19
|
0.34
|
-5.24
|
1.30
|
0.31
|
0.96
|
0.89
|
0.49
|
| |
East Asian (CHB)
|
-1.41
|
-0.74
|
-1.15
|
-0.85
|
-1.26
|
-4.91
|
-5.20
|
0.23
|
0.33
|
0.19
|
<0.00005
|
|
DCT
|
African (YRI)
|
-0.83
|
1.18
|
0.57
|
1.28
|
0.60
|
-3.54
|
-0.14
|
0.18
|
0.15
|
<0.005
|
0.84
|
| |
European (CEU)
|
-0.20
|
1.16
|
0.83
|
1.23
|
0.87
|
-3.89
|
2.30
|
0.24
|
0.39
|
0.16
|
0.78
|
| |
East Asian (CHB)
|
0.95
|
1.12
|
1.25
|
1.18
|
1.32
|
-4.61
|
3.72
|
0.54
|
0.24
|
0.44
|
0.74
|
|
KITLG
|
African (YRI)
|
0.14
|
0.35
|
0.33
|
0.35
|
0.33
|
-4.35
|
-0.28
|
0.11
|
0.13
|
0.17
|
0.79
|
| |
European (CEU)
|
0.97
|
1.25
|
1.36
|
1.33
|
1.44
|
-4.39
|
6.24
|
0.39
|
4.17E-05
|
<0.01
|
0.95
|
| |
East Asian (CHB)
|
1.10
|
0.29
|
0.68
|
0.28
|
0.70
|
-2.81
|
5.01
|
0.32
|
0.38
|
0.69
|
0.69
|
- aNeutrality-test statistics and combined P values for each population and gene for which a neutrality test distribution could be computed. Combined P values using the approach proposed by [64] were computed using three different neutrality distributions.
- bEwens-Watterson homozygosity test
- cMaximum likelihood model of Gutenkunst et al [44],
- dCosi best fit to the best-fit parameters of Schaffner et al. [45].
- eEncyclopedia of DNA Elements (ENCODE) data from resampled sequences from three different ENCODE regions.
