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Table 5 SNPs in Y. pesti s strains, relative to CO92

From: Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

  92A-4261 90A-4021 97A-7970 La Paz
Chromosome     
   SNPs, n 24 19 28 53
   Ambiguities, n 1 1 5 9
   Total calls, n 25 20 33 62
pCD1     
   SNPs, n 0 0 1 0
   Ambiguities, n 0 0 0 0
   Total calls, n 0 0 1 0
pPCP1     
   SNPs, n 0 0 0 0
   Ambiguities, n 0 0 0 1
   Total calls, n 0 0 0 1
pMT1     
   SNPs, n 1 1 1 1
   Ambiguities, n 0 0 0 0
   Total calls, n 1 1 1 1
  1. SNP, single-nucleotide polymorphism.
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Investigative Genetics

ISSN: 2041-2223

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