Parameter | sNMF (R2) | ADMIXTURE (R2) | fastSTRUCTURE (R2) |
---|---|---|---|
Sample size | Â | Â | Â |
8 | 98.2 | 99 | 86.66 |
10 | 99.5 | 99.52 | 98.69 |
20 | 99.74 | 99.82 | 99.71 |
40 | 99.85 | 99.9 | 99.86 |
50 | 99.87 | 99.93 | 99.9 |
100 | 99.91 | 99.95 | 99.95 |
nsnps | Â | Â | Â |
5 | 4.56 | 15.38 | 19.44 |
10 | 15.92 | 47.37 | 46.2 |
50 | 80.62 | 86.31 | 86.89 |
100 | 89.67 | 93.04 | 93.33 |
500 | 98.46 | 99.07 | 99.11 |
1,000 | 99.19 | 99.54 | 99.56 |
5,000 | 99.84 | 99.92 | 99.91 |
10,000 | 99.91 | 99.95 | 99.95 |
Nbreaks | Â | Â | Â |
5 | 88.82 | 88.37 | 87.46 |
10 | 94.38 | 94.86 | 94.43 |
50 | 98.74 | 98.87 | 98.8 |
100 | 99.33 | 99.41 | 99.38 |
500 | 99.81 | 99.85 | 99.84 |
1,000 | 99.86 | 99.91 | 99.9 |
5,000 | 99.91 | 99.94 | 99.94 |
10,000 | 99.91 | 99.95 | 99.95 |
alpha | Â | Â | Â |
0.01 | 99.94 | 99.99 | 99.99 |
0.03 | 99.93 | 99.97 | 99.95 |
0.07 | 99.93 | 99.97 | 99.92 |
0.1 | 99.93 | 99.97 | 99.91 |
0.3 | 99.91 | 99.96 | 99.95 |
0.5 | 99.91 | 99.95 | 99.95 |