Variable | sNMF (R2) | Admixture (R2) | fastStructure (R2) |
---|---|---|---|
Sampling depth, n1, n2 | Â | Â | Â |
8 | 99.92 | 100 | 39.56 |
10 | 99.83 | 100 | 34.03 |
20 | 99.87 | 100 | 100 |
40 | 99.81 | 100 | 100 |
100 | 99.74 | 100 | 100 |
Uneven sampling, n1 | Â | Â | Â |
8 | 98.94 | 99.45 | 98.59 |
10 | 99.43 | 99.78 | 99.32 |
20 | 99.61 | 100 | 92.21 |
40 | 99.67 | 100 | 100 |
100 | 99.74 | 100 | 100 |
Sequencing depth, nsnps | Â | Â | Â |
10 | 3.13 | 0.65 | 18.51 |
50 | 66.56 | 75.54 | 74.42 |
100 | 85.33 | 92.95 | 91.89 |
500 | 96.78 | 99.87 | 99.93 |
1,000 | 98.62 | 99.99 | 100 |
5,000 | 99.74 | 100 | 100 |
Population size, theta | Â | Â | Â |
1 | 99.73 | 100 | 100 |
2 | 99.74 | 100 | 100 |
5 | 99.74 | 100 | 100 |
10 | 99.72 | 100 | 100 |
Effective population size, N2 | Â | Â | Â |
100 | 99.98 | 100 | 100 |
2,500 | 99.94 | 100 | 100 |
7,500 | 99.82 | 100 | 100 |
10,000 | 99.74 | 100 | 100 |
Divergence time (F st ), T/(4Â N1) | Â | Â | Â |
0.000075 | 0.54 | 0.38 | 0.01 |
0.00025 | 0.24 | 0.03 | 0 |
0.00125 | 6.19 | 0.03 | 0.24 |
0.0025 | 69.36 | 95.28 | 0.53 |
0.0125 | 98.36 | 100 | 100 |
0.05 | 99.74 | 100 | 100 |
Constant migration rate, 4 Nm |  |  |  |
0.1 | 99.77 | 100 | 100 |
1 | 99.78 | 100 | 100 |
5 | 99.56 | 100 | 100 |
10 | 99.15 | 99.99 | 100 |
50 | 93.95 | 99.98 | 33.3 |
100 | 41.61 | 94.06 | 0.56 |