Criteria for selecting microhaplotypes: mixture detection and deconvolution

Investigative Genetics

Table 4 Additional documented variation in Microhap048 and MicroTetrad315

Provisional locus name	rs number (build 138)	Role in microhap	Chr.	Position GRCh37/hg19	Clustered allele frequency
Microhap048
	rs149195448		14	74250553	0.006
	rs12717560	SNP 1	14	74250557	0.331
	rs76446474		14	74250562	0.005
	rs374425620		14	74250591	n/a
	rs191001036		14	74250647	0.001
	rs113480934		14	74250694	n/a
	rs12878166	SNP 2	14	74250715	0.377
	rs12879393		14	74250730	0.286
MicroTetrad315
	rs8126597	SNP 1	21	21880086	0.298
	rs192464415		21	21880096	0.001
	rs76016088		21	21880100	0.027
	rs184686078		21	21880130	0.001
	rs138895664		21	21880157	0.073
	rs6517970	SNP 2	21	21880158	0.444
	rs202132081		21	21880159	0.064
	rs8131148	SNP 3	21	21880191	0.320
	rs6517971	SNP 4	21	21880231	0.420
	rs111754000		21	21880269	n/a

Additional documented variation in Microhap048 and MicroTetrad315. The “Clustered Allele Frequency” is the average in the 1000 Genomes data for the less frequent to vary rare allele at the SNP. The number of populations with data varies, and some have no frequency data available (n/a).

ISSN: 2041-2223