Table 3 Ion Torrent PGM whole mitochondrial DNA sequencing data, after one and two rounds of enrichment
ACAD ID | Rounds capture | Percentage coverage | Average length (± SD) | Number of bases covered | Unique reads | Mean X coverage (± SD) | Haplotype |
|---|---|---|---|---|---|---|---|
4464B | 1 | 97.4% | 42 (± 11.0) | 16,136 | 7,069 | 18 (± 12.3) | HV0e |
4464B (ancient) | 2 | 99.60% | 45 (± 11.7) | 16,507 | 14,837 | 40 (± 19.8) | HV0e |
10730A | 1 | 96.6% | 43 (± 11.3) | 16,004 | 5,760 | 15 (± 10.7) | B2b |
10730A (ancient) | 2 | 99.80% | 47 (± 12.2) | 16,540 | 16,138 | 46 (± 20.2) | B2b |
11995A | 1 | 62.3% | 40 (± 10.2) | 10,321 | 553 | 1 (± 1.6) | Low coverage |
11995A (forensic) | 2 | 97.70% | 45 (± 12.9) | 16,188 | 6,012 | 16 (± 11.2) | H1a |
Extraction blank | 1 | 1.5% | 41 (± 18.4) | 248 | 6 | 0 | n/a |
Extraction blank (EBC11049) | 2 | 0.20% | 0 | 28 | 1 | 0 | n/a |
8727C (forensic) | 2 | 99.50% | 43 (± 9.3) | 16,487 | 7,756 | 20 (± 9.7) | U5a2a1fNEW |
9210A (forensic) | 2 | 100% | 65 (± 20.4) | 16,569 | 7,865 | 31 (± 14.1) | J1c12 |