From: Method: a single nucleotide polymorphism genotyping method for Wheat streak mosaic virus
Sample | Origin | SNP Profile | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HC-Pro | CP | |||||||||||||||
Sidney 81 | Nebraska | M | C | C | A | G | C | G | A | W | R | R | Y | G | Y | W |
Type | Kansas | K | Y | Y | A | G | M | G | A | A | C | A | T | G | C | C |
OSU | Oklahoma | B | Y | Y | A | G | B | G | A | A | C | A | Y | G | Y | W |
Merredin 1 | Australia | K | C | C | A | G | C | G | A | W | S | R | T | G | C | W |
Merredin 2 | Australia | K | Y | Y | A | G | S | G | A | A | C | A | T | G | C | W |
Ginnindera | Australia | K | Y | Y | A | G | V | G | A | A | C | A | T | G | T | T |
Billings | Montana | T | C | C | A | G | C | G | A | A | A | A | Y | R | Y | Y |
Conrad1 | Montana | C | C | C | A | G | C | G | A | A | A | A | C | A | T | T |
Conrad2 | Montana | T | M | T | A | G | C | G | R | A | A | M | Y | R | Y | Y |
Conrad3 | Montana | T | C | T | A | A | C | G | R | A | C | A | T | G | C | C |
Helena | Montana | C | C | C | A | G | C | G | A | A | M | A | Y | G | Y | T |
HuntleyA | Montana | Y | C | C | A | G | C | G | A | A | A | A | Y | A | Y | Y |
HuntleyB | Montana | C | C | C | A | G | C | G | A | A | A | A | C | A | T | T |
Kalispell | Montana | C | C | C | A | G | C | G | A | A | A | A | C | A | T | T |
Toole | Montana | T | C | C | A | G | C | G | A | A | - | A | T | G | C | C |
OK-KF | Oklahoma | K | C | Y | A | G | S | G | A | A | S | R | C | G | Y | W |
OK-CC | Oklahoma | Y | C | C | A | G | C | G | A | A | A | A | C | G | T | T |
OK-Lab | Oklahoma | B | C | Y | A | G | C | G | A | A | M | A | Y | G | B | Y |
OK-425 | Oklahoma | K | C | C | A | G | C | G | W | A | V | R | H | S | B | W |
CO-17 | Colorado | K | C | C | R | G | C | G | A | A | M | A | Y | G | Y | H |
NE-932 | Nebraska | K | C | S | A | G | C | G | A | A | V | R | T | G | C | H |
KS-117 | Kansas | K | C | Y | A | G | S | G | A | A | S | R | C | G | Y | W |
bEl Batan 3 | Mexico | A | C | C | A | C | T | C | A | C | G | A | C | G | C | C |
bCzech | Czech | T | A | T | G | A | G | T | G | C | T | C | C | G | T | C |