Table 4 Y. pestis SOLiD™ system sequencing statistics

Beads found, n

34,339,098

25,716,321

36,469,495

28,150,279

Uniquely placed beads (≤ 3 mismatches), n (%)

22,951,932 (66.84)

17,593,054 (68.41)

23,353,330 (64.04)

19,273,600 (68.47)

Bases not uniquely covered, n (%)

242925 (5.03)

243881 (5.05)

243543 (5.04)

316674 (6.56)

Chromosome median coverage^a

168×

129×

176×

139×

pCD1 median coverage

379×

292×

328×

141×

pCD1 mean copy number, n

2.3

2.3

1.9

1.0

pPCP1 median coverage

2,350×

1,283×

1,694×

2,339×

pPCP1 mean copy number

14.0

9.9

9.6

16.8

pMT1 median coverage

241×

185×

248×

119×

pMT1 mean copy number

1.4

1.4

1.4

0.9