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Table 2 SNPs in B. anthracis strains, relative to Ames ancestor

From: Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

  A0032 A0324 A0377 A2012
Chromosome     
   SNPs, n 324 331 434 0
   Ambiguities, n 11a 7a 13a 1
   Total calls, n 335 338 447 1
pXO1     
   SNPs, n 18 23 26 0
   Ambiguities, n 0 1 0 0
   Total calls, n 18 24 26 0
pXO2     
   SNPs, n 10 8 11 0
   Ambiguities, n 0 0 0 0
   Total calls, n 10 8 11 0
  1. aFour shared ambiguities in imperfect repeat region.
  2. SNP, single-nucleotide polymorphism.
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Investigative Genetics

ISSN: 2041-2223

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