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Table 3 Primers used in this study.

From: Recovering mitochondrial DNA lineages of extinct Amerindian nations in extant homopatric Brazilian populations

Name

Primer name

Sequence 5'→3'

PCR amplification

HVSI1

MiL159263

TCAAAGCTTACACCAGTCTTGTAAAACC

 

MiL15996-M13F4

GTAAAACGACGGCCAGTTCCACCATTAGCACCCAAAGC

 

MiH164983

CCTGAAGTAGGAACCAGATG

HVSII2

MiL48-M13F

GTAAAACGACGGCCAGTCTCACGGGAGCTCTCCATGC

 

MiH480-M13R

CAGGAAACAGCTATGACCTGTTAAAAGTGCATACCGCCA

Fluorescent primers

HVSI/\HVSII1

M13- F4

GTAAAACGACGGCCAGT

HVSI1

MiH16401-F4

TGATTTCACGGAGGATGGTG

HVSII2

M13-reverse-F4

CAGGAAACAGCTATGAC

  1. 1HVSI, hypervariable segment I.
  2. 2HVSII, hypervariable segment II.
  3. 3MegaBACE 1000 Genetic Analyzer (GE Healthcare, USA).
  4. 4ALF DNA sequencer (Pharmacia, Uppsala, Sweden).